Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQNQLISVEDIVFRYRKDAERRALDGVSLQVYEGEWLAIVGHNGSGKSTLARALNGLILPESGDIEVAGIQLTEESVWEVRKKIGMVFQNPDNQFVGTTVRDDVAFGLENNGVPREEMIERVDWAVKQVNMQDFLDQEPHHLSGGQKQRVAIAGVIAARPDIIILDEATSMLDPIGREEVLETVRHLKEQGMATVISITHDLNEA-AKADRIIVMNGGKKYAEGPPEEIFKLNKELVRIGLDLPFSFQLSQLLRENGLALEENHLTQEGLVKELWTLQSKM
1VCI Chain:A ((27-237))-----------------------AVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKD--RNISMVFQ-------HMTVYENIAFPL--KKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVY---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90884 for 1514 contacts (-60.0/contact) +
2D Compatibility (PS) -21479 + (NN) -6386 + (LL) 6800
1D Compatibility (HY) -12800 + (ID) 3600
Total energy: -128349.0 ( -84.77 by residue)
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_1VCI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VCI-query.scw
PDB file : Tito_Scwrl_1VCI.pdb: