Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVEI-GDDRGRIDLVNPEILEKSGEQTGIE-GCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
4WXL Chain:D ((3-148))--ALNVLIYPDDHLKVVCEPVTEVNDAIRKIVDDMFDTMYQEKGIGLAAPQVDILQRIITIDVEGDKQNQFVLINPEILASEGE-TGIEEGCLSIPGFRALVPRKEKVTVRALDRDGKEFTLDADGLLAICIQHEIDHLNGILFVDYLS-------------


General information:
TITO was launched using:
RESULT:

Template: 4WXL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 720 -78983 -109.70 -548.49
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain D : 0.82

3D Compatibility (PKB) : -109.70
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_4WXL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WXL-query.scw
PDB file : Tito_Scwrl_4WXL.pdb: