Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLLAAGIIGLLTVSIASPSFAAEKQADTNVAVLFDGSGSMVQKTGGERKIDIAKKSVKSFAELLP---KDTNLMLRVFGHAGNNKLSGKALSCSTTETIYGLHPY-EGSLFDNSLSELK--PTGWTPIAKALADTRKEFEAF----DADGKNVVYLITDGEETCGGDPAAEIEKLRASNVDTIVNIIGFNFDVK--------GNEEMKQAAVAGGGEY-ISANSADEFEQAWEKEAQKFTE
4BJ3 Chain:A ((23-205))----------------------------LIDVVVVCDESNSIYP-------WDAVKNFLEKFVQGLDIGPTKTQVGLIQYANNP--------------RVVFNLNTYKTKEEMIVATSQTSQYGGDLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDGESHDGSMLKAVIDQCNHDN--ILRFGIAVLGYLNRNALDTKNLIKEIKAIASIPTERYFFNVSDWAALLEKA---------


General information:
TITO was launched using:
RESULT:

Template: 4BJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 813 -13070 -16.08 -79.69
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -16.08
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.584

(partial model without unconserved sides chains):
PDB file : Tito_4BJ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BJ3-query.scw
PDB file : Tito_Scwrl_4BJ3.pdb: