Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MVSGSDSR-SEPSQLSDRDLVESVLRDLSEA--ADKWEALVTQAETVTYSVDLGD----------------VRAVAN-----------SDGRL-LELTLHPG--------VMTGYAHGELADRVNLAITALRDEVEAENRARYGGRLQ
3E0Y Chain:B ((10-174))
EHLEIISLEEISMLVSSDFDLPEVLQHVTAKVATQLKVSVCNIYLREGDEVVLAATHGFDPAFIGKIRIKIGDGITGSVARDGQYISLSRASQKYNSMLSFPIGDKKEVYGVINLNTTSIRSFHEDEIYFVSIIANLILTAIKLRQQVASSR
General information:
TITO was launched using:
RESULT:
Template:
3E0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12311 for 664 contacts (-18.5/contact) +
2D Compatibility (PS) -12018 + (NN) -2795 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -30874.0 ( -46.50 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_3E0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E0Y-query.scw
PDB file :
Tito_Scwrl_3E0Y.pdb
: