Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MTSNQKA-------------------------------ILAG-GCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGT----HAEAVEIIFDPTVTDYRTLLEFFFQIHDPTTKD-RQGNDRGTSYRSAIFYFDEQQKRIALDTIADVEASGL--WPGKVVTEVSPAGDFWEAEPEHQDYLQRYPNGYTCHFVRPGWRLPRRTAESALRASLSPELGT
1FVG Chain:A ((7-198))
KIVSPQEALPGRKEPLVVAAKHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWENHDPTQ-GMRQGNDHGSQYRSAIYPTSAEHVGAALKSKEDYQKVLSEHGFGLITTDIREGQTFYYAEDYHQQYLSKDPDGYC-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1FVG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60393 for 1146 contacts (-52.7/contact) +
2D Compatibility (PS) -16420 + (NN) -12232 + (LL) 1744
1D Compatibility (HY) -7600 + (ID) 3000
Total energy: -97901.0 ( -85.43 by residue)
QMean score : 0.752
(partial model without unconserved sides chains):
PDB file :
Tito_1FVG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FVG-query.scw
PDB file :
Tito_Scwrl_1FVG.pdb
: