Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAVALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDECGD-VGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAA--LRGEQMKGHAATIEDQVRR-MIADW-GEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGR-FAKLYHELERGTDPLAYVDPYLPIESFR---RRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELM-----RHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAC-VRYRRRTGV |
| 2WV2 Chain:A ((29-462)) | ----------------GHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEV----TSDLLSGLLSAVYRDGTP-MSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN-----NVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK-------VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLR-DEVPDPDYHTMVVGPTASQCRVKYIRR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WV2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255821 for 3389 contacts (-75.5/contact) +
2D Compatibility (PS) -44463 + (NN) -23739 + (LL) 1604
1D Compatibility (HY) -34000 + (ID) 7000
Total energy: -363419.0 ( -107.23 by residue)
QMean score : 0.609
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