Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADQLTPHLEIPTAIKPRDGRFGSGPSKVRLEQLQTLTTTA-------AALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLID--KRSLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPG-------SAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGSDDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL- |
| 1BJO Chain:A ((1-360)) | -----------------QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTV--DGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAID-ETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAG-LTIVIVREDLLGK------ANIACPSILDYSILNDN---GSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNS-DFYRNDVAKRNRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGG--MRASIYNAMPLEGVKALTDFMVEFERRHG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162793 for 2880 contacts (-56.5/contact) +
2D Compatibility (PS) -37491 + (NN) -24772 + (LL) 1960
1D Compatibility (HY) -10400 + (ID) 3550
Total energy: -237046.0 ( -82.31 by residue)
QMean score : 0.437
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