Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MACERLGGQSGAADVDAAAPAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWD---AVKDRLSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSPKHAETARYVAGLSGDVKDAKRGN |
4AYT Chain:A ((359-567)) | -----------------------------------IFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASG-----TISLDGHDIRQLNPVW-LRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLS-TIKNANMVAVLDQGKITEYGKHEE---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111067 for 1583 contacts (-70.2/contact) +
2D Compatibility (PS) -21673 + (NN) -2682 + (LL) 3652
1D Compatibility (HY) -12800 + (ID) 3400
Total energy: -147970.0 ( -93.47 by residue)
QMean score : 0.448
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