Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKDFQRVRIGIGRPPG---RKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVHAW
3V2I Chain:A ((22-217))
--MIKLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLYGEEVHLLEPQTYMNRSGQSVVALAHFFKILPNEILVAHDELDLPPGAVKLKLGGGSGGHNGLKDISAHLSSQQYWRLRIGIGHPRDMIP--DVANFVLKPPRKEEQDVIDAAIERALAVMPAVVKGETERAMMQL---
General information:
TITO was launched using:
RESULT:
Template:
3V2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110622 for 1558 contacts (-71.0/contact) +
2D Compatibility (PS) -19672 + (NN) -2665 + (LL) 860
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -147799.0 ( -94.86 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3V2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V2I-query.scw
PDB file :
Tito_Scwrl_3V2I.pdb
: