Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSLLP-----A---HPQLEVLQGDITDADVCAAAVD--GIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRA-GVQRFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWGNGDQT-MFR-K---LFESVLKGH-VKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEP-LAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
| 2Z1M Chain:A ((3-339)) | -------------GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSF----EQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQE-IPQTEKTPFY--PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQ------PEPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGIN--EKGID--RNTG----KVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKRVR----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157833 for 2748 contacts (-57.4/contact) +
2D Compatibility (PS) -33855 + (NN) -12441 + (LL) 3436
1D Compatibility (HY) -4400 + (ID) 2600
Total energy: -207693.0 ( -75.58 by residue)
QMean score : 0.365
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