Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGFAGKVAVVTGAGSGIGQALAIELARSGAKVAISDV-DTDGLADTEHRLKAISTPVKTDRLDVTEREAFLAYADAVNEHFGTVNQIYNNAGIAFTGDIEVSQFKDIERVMDVDFWGVVNGTKAFLPHLIASGDGHVINISSVFGLFSAPGQAAYNSAKFAVRGFTEALRQEMALAGHPVKVTTVHPGGVKTAIARNATAAEGLDQAELAETFDKRVAHLSPQRAAQIILTGVAKNKARVLVGVDAKVLDLVVRLTGSGYQRIFPIITGRLIPRPR |
1NFF Chain:B ((5-190)) | ---LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG----KAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPM---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NFF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87552 for 1573 contacts (-55.7/contact) +
2D Compatibility (PS) -20184 + (NN) -7781 + (LL) 6908
1D Compatibility (HY) -12000 + (ID) 3200
Total energy: -123809.0 ( -78.71 by residue)
QMean score : 0.533
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