Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCQTCRVGKRRDAREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVTNPARWALLYGSPVPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEH
3QKX Chain:A ((3-187))
----------RQAKTDLAEQIFSATDRLMAREGLNQLSMLKLAKEANVAAGTIYLYFKNKDELLEQFAHRVFSMFMATLEKDFDE--TKPFFEQYRQMWKNIWYFLQENPTILSNLKQYESL--PNFK---DICKNIKNCRWDLFCHQAQKAGLLA-------------------------ELSEDILFLLSLKTAINLASDAKFI--------LKPEILESVIERSWRAIQ--
General information:
TITO was launched using:
RESULT:
Template:
3QKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95242 for 1230 contacts (-77.4/contact) +
2D Compatibility (PS) -19479 + (NN) -6892 + (LL) 2644
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -124969.0 ( -101.60 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_3QKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QKX-query.scw
PDB file :
Tito_Scwrl_3QKX.pdb
: