Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRV-----DVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDT-TVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI-ARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAALW |
| 1IY8 Chain:D ((14-267)) | --------RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAAY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162646 for 2123 contacts (-76.6/contact) +
2D Compatibility (PS) -26319 + (NN) -713 + (LL) 260
1D Compatibility (HY) -10400 + (ID) 4400
Total energy: -204218.0 ( -96.19 by residue)
QMean score : 0.373
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