Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MATSKVERLVNLVIALLSTRGYITAEKIRSSVAGYSDS-----PSVEAFSRMFERDKNELRDLGIPLEVGRVSALEPTEGYRINRDAYALSPVELTP----DEAAAVAVATQLWES---PELITATQGALLKLR-AAGVDVDPLDTG------APV--AIASAAAVSGLR-GSEDVLGILLSAI---DSGQVVQFSHRSSRAEPYTVRTVEPWGVVTEKGRWYLVGHDRDRDATRVFRL--SRIGAQVTPIGPAG------ATTVPAGVDLRSIVAQKVTEVPTGEQATVWVAEGRATALRRAGRSAGPRQLGGRDGEVIEL--EIRSSDRLAR----EITGYGADAIVLQPGSLRDDV--LARLRAQ-AGALA------ |
| 4I6M Chain:B ((3-439)) | PFRQDSILIIYPRSQTTLVQFGLNEETFTVPELEIPTQIYRTTRQDGSYTYHSTNKDNKAELIKPIQNGEIIDISAFTQFLRLIFVSILSDRANKNQ-DAFEAELSNIPLLLITHHSWSQSDLEIITQYVFESLEINNLIQLPASLAATYSMISLQNCCIIDVGTHHTDIIPIVDYAQLDHLVSSIPMGGQSINDSLKKLLPQWDDDQIESLKKSPIFEVLSKNSDLEFNTFWDEKGNEIKVGKQRFQGCNNLIKNISNRVGLTLDNIDDINKAKAVWENIIIVGGTTSISGFKEALLGQLLKDHLIIEPEEEKSKREEEAKSFVPTIEYVQCPTVIKLAKYPDYFPEWKKSGYSEIIFLGAQIVSKQIFTHPKDTFYITREKYNMKGPAALWDVQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4275 for 2192 contacts (2.0/contact) +
2D Compatibility (PS) -33956 + (NN) 1397 + (LL) 92
1D Compatibility (HY) -4000 + (ID) 2400
Total energy: -34592.0 ( -15.78 by residue)
QMean score : 0.115
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