Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFG-PEWVGVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGA-----AAGHALVLGSGGTAPAAVVGLAELGVTDITVVARNS---DKAARLV-DLGTRVGVATRFCAFDS-GGLADAVAAAEVLVSTIPAEVAAGY-----A--GTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQFTGLPAPREAMTCALAALD |
| 3TNL Chain:A ((34-314)) | -TGHTELIGLIATPIRHSLSPTMHNEAFAKLGL-DYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEIL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177078 for 2227 contacts (-79.5/contact) +
2D Compatibility (PS) -28080 + (NN) -10597 + (LL) 640
1D Compatibility (HY) -15600 + (ID) 3500
Total energy: -234215.0 ( -105.17 by residue)
QMean score : 0.409
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