Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRIIGGVAGGRRIAVPPRGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAG--TTSPVDLVLADPPYNVDSADVDAILAAL--GTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERLFANV
1WS6 Chain:A ((16-184))
-VRILGGKARGVALKVPAS-ARPSPVRLRKALFDYLRLRY-PRRGRFLDPFAGSGAVGLEAASEG-WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFMAPPYAMD---LAALFGELLASG--LVEAGGLYVLQHPKDLY-------LPLGERRVYGENALTLVE------
General information:
TITO was launched using:
RESULT:
Template:
1WS6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62965 for 1341 contacts (-47.0/contact) +
2D Compatibility (PS) -17855 + (NN) -11296 + (LL) 700
1D Compatibility (HY) -5200 + (ID) 2050
Total energy: -98666.0 ( -73.58 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_1WS6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WS6-query.scw
PDB file :
Tito_Scwrl_1WS6.pdb
: