Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTARPLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYP---LPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
1LAU Chain:E ((78-242))
---------------------------------------------------------DEVRVVIIGQDPYHHPGQAHGLAFSVRANVPP-PPSLRNVLAAVKN--CYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVFMLWGTHAQNAIRPDPRVHCV-LKFSHPSPLSKV-PFGTCQHFLVANRYLETRSISPIDW---
General information:
TITO was launched using:
RESULT:
Template:
1LAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75279 for 1197 contacts (-62.9/contact) +
2D Compatibility (PS) -18034 + (NN) -13451 + (LL) 5384
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -118630.0 ( -99.11 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_1LAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LAU-query.scw
PDB file :
Tito_Scwrl_1LAU.pdb
: