Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLAERTVLVTGANRGMGREYVAQLLGRKVAKVYAATRNPLAIDV---SDPRVIPLQLDVTDAVSVAEAADLATDVGILINNAGISRASSVLDKDTSALRGELETNLFGPLALASAFADRIAERS--GAIVNVSSVLAWLPLGMS--YGVSKAAMWSATESMRIELAPRGVQVVGVYVGLVDTDMGRFADAPKSDPADVVRQVLDGIEAGKEDVLADEMSRQVRASLNVPARERIARLMGN
1WNT Chain:C ((5-208))
---LAGRRVLVTGAGKGIGRGTV-QALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ---ATWSDPHK-AKTMLNRIPLGK------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WNT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79873 for 1533 contacts (-52.1/contact) +
2D Compatibility (PS) -21286 + (NN) -7434 + (LL) 3320
1D Compatibility (HY) -10800 + (ID) 3350
Total energy: -119423.0 ( -77.90 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_1WNT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WNT-query.scw
PDB file :
Tito_Scwrl_1WNT.pdb
: