Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESM-REPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECV-AVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAA-TELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIA---ALPDAVRSPDLIALSQLICRREC |
| 1WY0 Chain:A ((4-341)) | ----------------YEELFARIKEKAKLIDEKIFELIPEKDPRVLYEAARHYP-----------LAGGKRVRPFVVLTSTEAVGGDPLRAIYPAVAIELIHNYSLVHDDIMDMDETRRGKPTVHRIWGVNMAILAGDLLFSKAFEAVARAEIPPEKKARVLEVIVKASNELCEGQARDLEFEKKSTVTIEEYMEMISGKTGALFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRKGKKTLIVAHFFENADEKDKQRFLKIFGK---DIKSDVMEAIDLLKKYGSIDYAAEIAKDMIKKANEALRILPKSKARMDLELLAKFIVERE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213246 for 2730 contacts (-78.1/contact) +
2D Compatibility (PS) -34791 + (NN) -23781 + (LL) 1576
1D Compatibility (HY) -16800 + (ID) 5000
Total energy: -292042.0 ( -106.98 by residue)
QMean score : 0.501
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