Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MP-VVKINAIEVPAGAGPELEKRFAHRAHAVENSPGFLGFQLLRP-VKGEERYFVV-THWESDEAFQAWANGPAIAAHAGHRANPVATGASLLEFEVVLDVGGTGKTA
1TZ0 Chain:B ((5-110))
GYMFIETKTFTVKEGTSNIVVERFTGEGI-IEKFEGFIDLSVLVKKVRRGDEEVVVMIRWESEEAWKNWETSEEHLA----------GPDHIINVDHAVYYVKSSKAA
General information:
TITO was launched using:
RESULT:
Template:
1TZ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32309 for 578 contacts (-55.9/contact) +
2D Compatibility (PS) -10368 + (NN) -2664 + (LL) 564
1D Compatibility (HY) -7200 + (ID) 1000
Total energy: -52977.0 ( -91.66 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_1TZ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TZ0-query.scw
PDB file :
Tito_Scwrl_1TZ0.pdb
: