Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRHGLLRSLFAAAALLGAAGVFAASAEPLRLEVYNPGEKAIFAVSSELLVGQ--REAMLIDAQFSRADAEQLVKRIQASGKTLSTIYISHGDPDFYFGLDVLKAAFPEAKILATAQTVAHIQATKDAKLAYWGPILKDNAPTSLVVPEPLKGDQLKLEGHALKVVDLKGPSPDRTVLWIPSLK-------TVVGGVLVESGSHVWTA--------DTQTQASRQAWVAMLDRIEALQP-RRVVPGHFTGEEPK--GLDGVRFTRDYLKALEAELPKARDSAALVEAMKRRYPNLPGEEGLELSAKVLKGEMQWP |
3R2U Chain:A ((23-267)) | ---------------------------NAMFFKQFYD---KHLSQASYLIGCQKTGEAMIIDPIRDL---SSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKL-NANIYVSGESDDTLGYKNM--------------P--NHTHFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPMGLFSGDFIFVGDIGRPDLLEKAVKVEGSSEIGAKQMFKSIESIKDLPDYIQIWPGHGAGSPCGKSLGAIPTSTLGYEKQTNWAFS-ENNEATFIDKLISDQPAPPHHFAQMKKINQFGMNLYQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56415 for 1891 contacts (-29.8/contact) +
2D Compatibility (PS) -24497 + (NN) -11383 + (LL) 3536
1D Compatibility (HY) -4400 + (ID) 1850
Total energy: -95009.0 ( -50.24 by residue)
QMean score : 0.447
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