Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKSRNPSLGQVSDFDIRLLRIFKTIVECGSFSAAESTLGLSRSAISLHMGDLEKRLGMRLCQRGRAGFALTDEGREVYRATQTLLAALEGFRAEVNDLHQHLRGELNIGIINNLVTLPQMRITHALSALKGQGPQVRINIGMTTPNEIELGVLDGHLHVGVVPLISPLSGLEYLPLYDEHAQLYCSRGHALFERADGDIAVDEVLAADAVAPSYRL--PA--E-AQ-ARHQ-----ELNNSASASDREGMAFLILTGNFIGYLPSHYAADWVAAGMLRPLLPERFHYAIALTIVTRKGRRPNLVLERFLEAVAVS |
| 3JV9 Chain:A ((3-208)) | -------------------------------------------------------------------------------------------------------EGAFKLGLIFTVAP---YLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPLYDEPFFVIVPKGHSFEELD--AVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQGLTNTLQGSSINTIRHMVASGLAISVLPATALTEN-DHMLFSIIPFEGTPPSRRVVLAYRRNFVRPKALSAMKAAIMQS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121523 for 1436 contacts (-84.6/contact) +
2D Compatibility (PS) -20980 + (NN) -5435 + (LL) 7664
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -146824.0 ( -102.25 by residue)
QMean score : 0.244
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