Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKVIFPPGPLIFNALNTTPLENVKVVIIGQDPYHGPGQAHGLCFSVQPGV-PTPPSLQNIYKELNRDLNIPIPNNGYLQRWAEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKLIDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL
4WRV Chain:A ((21-238))
---------VERGWAAALEPVADQ--VAHMGQFLRAEIAAGRRYLPAGSNVLRAF-TFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP--
General information:
TITO was launched using:
RESULT:
Template:
4WRV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92410 for 1772 contacts (-52.2/contact) +
2D Compatibility (PS) -23734 + (NN) -14014 + (LL) 292
1D Compatibility (HY) -19600 + (ID) 4950
Total energy: -154416.0 ( -87.14 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_4WRV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WRV-query.scw
PDB file :
Tito_Scwrl_4WRV.pdb
: