Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLTLRPAGVDDLSALVELENRCFDYDR-----LSRRNFQWMLTRAHASLTVAEGDGGVLGYALVLFHEG-------TSLARLYSIAIDPRARGIGLGQKLLEAAEQAARDNDRAYMRLEVRPDNRGAIALYERNGYRPFATVRDYYEDHSEALRFEKRIRNPGHDQRRHVPFYRQTTDFTCGPACLLMAMGALQPERQLTRREELRLWREATTIYMTAGHGGCSPQGLALAAWRRGFRVKLVLSAGGPLFLDGVRNEDKKAVMRLVHEDFCEELDASGVEQKRSARLDIPRQLARGGQPLVLISSYRLTRSKAPHWVLVTHYDEDFVYLHDPDVDHSQHRQPLDCQHIPVSHAEFDKMSRFGRSKLRAAVILFNPE |
3JVN Chain:A ((3-136)) | --PVIRRAKEIDLYCLNSLMYKLHDEHHQQCPD--EKSIARYLDDPECMVYVAEMDDVIIGFITGHFCELISTVSKLVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEIFVEVW--NKGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59659 for 770 contacts (-77.5/contact) +
2D Compatibility (PS) -12254 + (NN) -6685 + (LL) 16752
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -68046.0 ( -88.37 by residue)
QMean score : 0.522
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