Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRNVRAYQDRGLLPPPERRGRVGVYFDSHLKRLRLISQLLERGYSSANIKELLEAWEQGRDLDHVLGLDQAIIGEWNLETPGSIGFDELQAIFGDELNDRVIDKAQALGLLLFDGERMKIPSPRLFQAGLELYRSGIPLEALLD--QLGELRSDTEHLAAGIVRLIVTHLVDGRGTDLLPGAPDLQELAKVFLRLRPLAEHVVQVELARGLKLSANEMLGERVGEMLRKLEKPS |
1O9W Chain:A ((1-176)) | AVSFIGSTENDVGPSLGSYSRLPFVYDTRNKI----------GYQNANVWHISK--------GFCVGLDGKV----DLPVVGSLDG---QSIYG--LTEE-------VGLLIWMGDTK-------YSRGTAM--SGNSWENVFSGWCVGANTASTQGLSVRVTPVILKRN---------SARYSVQKTSIGSIRMRPYNG-------------SSAGSVQTTVNFSLNPFTLND |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29341 for 1307 contacts (-22.4/contact) +
2D Compatibility (PS) -16284 + (NN) 7582 + (LL) 5308
1D Compatibility (HY) -10000 + (ID) 1850
Total energy: -44585.0 ( -34.11 by residue)
QMean score : 0.119
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