Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MPNDMEDHLLTVLSVASGVPKEEISRDSRME-DLAFDSLVVSELSLKLRKEFGVTGVDDELDL-LETVDELFQLVEKHRAA-----------
2L9F Chain:A ((1-102))
MARADDTALPAATGALELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAMPTNFATATVREMAEALEAREREAPHLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2L9F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30044 for 585 contacts (-51.4/contact) +
2D Compatibility (PS) -8502 + (NN) -7291 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -49437.0 ( -84.51 by residue)
QMean score : 0.707
(partial model without unconserved sides chains):
PDB file :
Tito_2L9F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L9F-query.scw
PDB file :
Tito_Scwrl_2L9F.pdb
: