Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQKIVRVGDIQIGNDLPFVLFGGMNVLESRDLAMQVCEEYVRVTEKLGIPYVFKASFDKANRSSIHSFRGPGLEEGMKIFEEIKKTFKVPVITDVHEPFQAQPVAEVCDIIQLPAFLSRQTDLVVAMARTNAVINIKKAQFLAPQEMKHILTKCEEAGNDRLILCERGSSFGYNNLVVDMLGFGIMKQF--EYPVFFDVTHALQMPGGRADSAGGRRAQVTDLAKAGLSQKLAGLFLEAHPDPEHAKCDGPCALRLNKLEAFLSQLKQLDELIKSFPAIETA |
4JTI Chain:D ((3-277)) | -----IKINDITLGNNSPFVLFGGINVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEVCDVIQLPARLAQQTDLVVAMAKTGNVVNIKKPQGLSPSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTR--------GRRAQALDLALAGMATRLAGLFLESHP-----------ALPLHLLEDFLIRIKALDDLIKSQPIL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JTI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192971 for 2119 contacts (-91.1/contact) +
2D Compatibility (PS) -28002 + (NN) -14234 + (LL) 672
1D Compatibility (HY) -31600 + (ID) 8750
Total energy: -274885.0 ( -129.72 by residue)
QMean score : 0.584
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