Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPQIVILPHADHCPEGAVFEAKPGETILDAALRNGI-EIEHACEKSCACTTCHVIVREGL-DSMEPSDELEDDMLDKAWG-LEPDSRLSCQAVVADE--DLVVEIPKYTINQVSEGH
4JWU Chain:C ((8-109))
-SKVVYVSHDGTRRE---LDVACGVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELKPNSRLCCQIIMTPELDGIVVDVP-----------
General information:
TITO was launched using:
RESULT:
Template:
4JWU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52483 for 715 contacts (-73.4/contact) +
2D Compatibility (PS) -10732 + (NN) -4835 + (LL) 964
1D Compatibility (HY) -10000 + (ID) 1750
Total energy: -78836.0 ( -110.26 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_4JWU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JWU-query.scw
PDB file :
Tito_Scwrl_4JWU.pdb
: