Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNVFVFSRLAPEHLERLQCQFNVRVLEPKQGDIDAQYAAALPDTHGMIGVGRPLGARQLEQAKQLEVISSVSVGYDNYDLDYLNRRGIALTNTPDVLTETTADLGFALLISAARRVAELDAWVKAGNWKRTVDAPQF-GTDVHGKKLGILGLGRIGAAIARRGRFGFGMQVLYH-GNNRKPELEQELGARFLGFDELLGEADFVCVVVPLGAQTRQLIGARELGLMKPSAILVNVARGQVVDEAALVAALREKRILGAGLDVYEKEPLA--------ESPLFALDNVVTLPHIGSATHETRRAMAERALQNFEAALRGERPLDLVNPQVWRRG |
| 4NU6 Chain:A ((62-326)) | ------------------------------------------------------------LQACPELRVIGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGW--QPRFYGTGLDNATVGFLGMGAIGLAMADRLQ-GWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVKLEIERCAAQNILQALAGERPINAVN------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NU6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148956 for 1996 contacts (-74.6/contact) +
2D Compatibility (PS) -28245 + (NN) -15977 + (LL) 4760
1D Compatibility (HY) -20000 + (ID) 5100
Total energy: -213518.0 ( -106.97 by residue)
QMean score : 0.418
|
|
|