Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGR--SEERLGPLLR---GQREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--------EGDCAMVTYNLNERA--ERPVIEYAAAHAKGILVKKALASGHACLG--------------------------------------------AGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQ--ALKKA |
| 3LUT Chain:A ((36-346)) | -----LQFY-RNLGKSGLRVSCLGLGTWVTFGG----------QITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKA-ETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNT---PMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114983 for 2156 contacts (-53.3/contact) +
2D Compatibility (PS) -26579 + (NN) -8470 + (LL) 804
1D Compatibility (HY) -11600 + (ID) 3150
Total energy: -163978.0 ( -76.06 by residue)
QMean score : 0.561
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