Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRILLLGANGQVGWELQRALAPLGEL--LV---------------------CDRRRADLADPEGLARLVRAERPQFIVNAGAYTAVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGS------------VPFAEDAPTGPLSVYGQTKLEGEQAIRAS----GCRHLIFRTSWVYAARGG--NFAKTMLRLAGQRDELKVV--ADQFGAPTSAELIADVTAQALQRLCWDVELAARASGTYHLVASGETSWHLYARFVIEQALERGWELQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVL--PDWRYHAGRMIQELSEQGPL |
| 1OC2 Chain:A ((4-327)) | FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG--------RMGETYLIGADGEKNNKEVLELILEK-------MGQPKDAYDHVT--D---RAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140789 for 2350 contacts (-59.9/contact) +
2D Compatibility (PS) -30894 + (NN) -18102 + (LL) 2232
1D Compatibility (HY) -3200 + (ID) 2650
Total energy: -193403.0 ( -82.30 by residue)
QMean score : 0.605
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