Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------MLLCFRFGNQSMKRENFTLITDFVFQGFSSF------HEQQITLFGVFLALYILTLAGNIIIVTIIRMD-----LHLHTPMYFFLSMLSTSETVYTLVILPRMLSSLVGMSQPISLAGCATQMFFFVTFGITNCFLLTAMGYDRYVAICNPLRYMVIMNKRLRIQLVLGACSIGLIVAITQVTSVFRLPFCARKVPHFFCD---IRPVMKLSCIDTTVNEILTLIISVLVLVVPMGLVFI-SYVLIISTILKIASVEGRKKAFA----------TCASHLTVVIVHYS----CASIAYLKPKSENTREHDQLISVTYTVITPLLN---------PVVYTLRNKEVKDALCRAVGGKFS------------------------ |
| 4QLA Chain:A ((19-442)) | LDLEEWWGPPELKQKQDTSIKPFEITFSETMVKELKERIKKRRPFAPPLEGVGFKYGFNSKQLDSWLKYWAEEYPFAERQKFLNQYPHFKTNIQGLNIHFMRITPKVPKGVEIVPLLLLHGWPGSVREFYEAIPHLTAVSKDRNFALEIIAPSLPG--YGFSDAAVRPGLA-----AAEVAVIFKNLMARLGYKQYYVQGG--DWGALIGSAMATFFPKEIIGFHSNMALTLSPAATFLEFVGALFPSLIVEPELANRLYPLSEKYSTLLEELGYMHIQATKPDTVGIGLTDSPAGLLAYILEKFSTWTNPDLRSKEDGGLSYRWTKDQLIDNLMLYWSTKSIVTSMRLYAESFSSRHFDLKLDEIQVQVPTWVLQAKHELAYQPPCILKMKYPKLVNASVIEDGGHFLAFELPEIFAKDVLKAIGEFRKLKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278704 for 2286 contacts (-121.9/contact) +
2D Compatibility (PS) -31622 + (NN) 3023 + (LL) 828
1D Compatibility (HY) -11200 + (ID) 2250
Total energy: -319925.0 ( -139.95 by residue)
QMean score : 0.242
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