Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MCALKGFLEENFYTYSVAKGNHSTVYEFILLGLTDNAELQ----VTLFG-------IFLVVYLASFMGN--FGL-IMLIQISPQLHTPMYFFLSHLAF-----------------VDFSFTSSVAPNTLVNFLCE-------------VKSITFYACAIQVCCFITFVVCELYLLSIM--------------------AYDRYVAICNPLLYV-----ILIPRKCIKLIAS--------------TYVYGFTVGLVQTVATSYLSFCDSNVINHFYHDDVPLVALACSDTHVKELMLLIIAGF---------------------NTLCSLVIVLISYGFIFFAILRIHSAEGRQKAFSTSASHLTSITIFYGTIIFMYPQPKSSHSLNMDKVASVFNVVVIPT-LNPL----------IYSLRNQEVKNALKRIIEKLCLAVK----- |
| 4XGC Chain:D ((5-457)) | DRELVSIRRFLKERLQRDYTTLRGYAKERSNVRLLLQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQMQLENAADGKVFGSFAENLAFLLQCLKSKSVIFILEEFDLFCAHHNQTLLYNLFDVSQSAQAPICVLGVTCRLDVIELLEKRVKSRFSHRQVFLFPSLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQNIQSGALYFSRNHFDPGEYGFSPRLRDAWNKQICKVLAT---QQARSTLQALHDFDISEAYLKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCLIIAIKHHSQIYDRDSFN--------FEIIYARFSKFAKVSTTMQAVERSIVLKAFEHLRIAELIMPLTKVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQWAQSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -308296 for 2079 contacts (-148.3/contact) +
2D Compatibility (PS) -32814 + (NN) -4241 + (LL) 700
1D Compatibility (HY) -22000 + (ID) 2750
Total energy: -369401.0 ( -177.68 by residue)
QMean score : 0.239
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