Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMIGFEKPFKLEEGNLFK-VYEQRKPTPENDDILVKVNSISVNPVDTKQRQMKVT---QAPRVLGFDAIGTVEAIGPDVTLFSPGDVVFYAGSP---------------------NRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPSENVGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHKED-LVRQFKEKE-IPLVDYIFCTYNTDLYYNTMIELIKPLGHITTIVAFNED---QDLNALKLKSITFTHEFMFARPIHRTPDMIKQHEYLEDITKNIELGHYQPTTTQVFEGLSPENLYQAHQLLEKQSMIGKLVINI |
| 3UOG Chain:A ((28-363)) | MQEWSTETVA----PHDLKLAE-RPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLR------AGDRVVVQGT-GGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEI-AGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQG------------ISVGHRRALEDLVGAVDRLGLKPVIDMRY-KF--TEVPEALAHLDRG-PFGKVVIEF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -175784 for 2755 contacts (-63.8/contact) +
2D Compatibility (PS) -32583 + (NN) -5763 + (LL) 1456
1D Compatibility (HY) -9600 + (ID) 4000
Total energy: -226274.0 ( -82.13 by residue)
QMean score : 0.508
|
|
|