Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVDFGSKLLIESFELETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDNVTANDYQAIISNPPIRAGKKIVHAILEGAYDHLQETGELWIVIQKKQGGPSAEKKMEEVFGNVETVAKDKGYFIFKSVKN
3A27 Chain:A ((90-223))
-------------------------GCLFKLDVAKIMWSQGNI-EERKRMAFISN---ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH-----KTHKFLDKTFEFLKDRGVIHYHETVAE---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57576 for 1052 contacts (-54.7/contact) +
2D Compatibility (PS) -14528 + (NN) -6644 + (LL) 3856
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -79142.0 ( -75.23 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_3A27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A27-query.scw
PDB file :
Tito_Scwrl_3A27.pdb
: