Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVQRIQAIENLIHEKGSI-----SLDDLCEQFNVSKNTVRRDIAKLLQKNTIQKVYGGVVSVYNNPEEIRPFENRDTENHLEKQLIGKAAADFIEENDLIFIDSGTTTSCLAAALPTDKEITIITNSLDVINFASEMDNVKLIVIGSTFKPSTKSFVGVENWGFFEKYNITKAFMAATALSTAHGVMNSDI--LEYEIKRHMMEKATAKFLLVDH----TKVDKSALLTYGELAEFDWLVTSKDIAGGCLGYCEDVGVLVRLV |
| 3F8M Chain:A ((14-243)) | LKHQVVRAELDRMLDGMRIGDPFPAEREIAEQFEVARETVRQALRELLIDGRVERR--GRTTVVARPKIRQPLGMGSYTEAAKAQ-------GLSAGRILVAWSDLTADEVLAGVLGVDVGAPVLQ--LERVLTT---DGVRVGLETTKLPAQRYP-------------GLRETFDHEASLYAEIRSRGIAFTRTVDTIDTALPDAREAALLGADARTPMFLLNRVSYDQDDVAIEQRRSLYRGDR-------MTFTAVMHAKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27488 for 1538 contacts (-17.9/contact) +
2D Compatibility (PS) -23559 + (NN) -7882 + (LL) 1628
1D Compatibility (HY) -3200 + (ID) 1800
Total energy: -62301.0 ( -40.51 by residue)
QMean score : 0.240
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