Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRHFETTRRIVIKVGTSSLVQTSGKINLSKIDHLAFVISSLMNRGMEVILVSSGAMGF--GLDILKMDKR------PQEISQQQAVSSVGQVAMMSLYSQIFSHYQTHVSQIL------LTR-----------DVVVFPESLQNVTNSFESLLSMGILPIVNENDAVSVDEMDHKTKFGDNDRLSAVVAKITKADLLIMLSDIDGLFDKNPNIYDDAVLRSHVSEITDDIIKSAGGAGSKFGTGGMLSKIKSAQMVFDNNG-QMILMNGANPRDILK-VLDGHNIGTYFAQGK |
2BUF Chain:A ((23-297)) | ----RFVGKTLVIKYGGNAMESEE------LKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAKKLTVTRQIIDIGHVGEVTGVNV-GLLNMLVKGDFIPVIAP---IGVGSN-GESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQG------QVLTGLSTEQ--VNELI---ADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BUF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143883 for 2026 contacts (-71.0/contact) +
2D Compatibility (PS) -25491 + (NN) -2981 + (LL) 400
1D Compatibility (HY) -10400 + (ID) 2150
Total energy: -184505.0 ( -91.07 by residue)
QMean score : 0.448
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