Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDVSSSPNITFMLQYTEANPQY--------VDYTNREEAVKIDEELSLETNRQMIEGLTEDELTRIQEAV-PETQLNFREYIDYMNRS--YATEEQSKELTAIFTQEADYLQKLRLIDLKNKLESAYQNGSLLWQGVISFDNAFLAEQGLYDVATGQV----DQKAIKAVMRDMMPTLIQKEGLSDSAFWWGNIHLNTDNIHIHFGLSEVESNREKIFYQPRGRMEYKGNFSQKTINRFKSGVYHGLLKEETRSNLLRKEQILANLKAD---FITSIYQKDKITSSAEKNFLEQAYNHLPLNKKWRYGSNARDFAVSKFFL-----DRYLDSYLNNEGSAAYQEFLKETRDFLQ----TYEGVYSAEKNKIYEKLRKVDGQTIRTLAESKGYDLEHHLARRVMDLRER-LANNILRSFREAAPQIQD---VQLEKNLESFSVLNQKKILEQHPEASVVKSQKAWQKLGYFVKA-----GEQPLEIIRPVYKSY-------DKHGKGIGRPEFVSDTVYDISQLTENIQLK-SLTLKDLSLFSSNELKELVDAAKLKTNPTERERRELGTYRYALKLSILESSQKELQVRQKLL-----------EQVQPLASD---QPFLDFKKQLIAQELQAIALQLTPN---YKLSEDDKALKNRLKRQF---EDSVALPVSKATPGAIQLPIRQLWTELGLVHHIQDENILTLLKGTSTTKQAYIEELQTHISIFQLKYQINNRNKQISQLSD----EATIKEMRIANAKGFSELKRLYDTLQPSDDGQNQISQAVSK---QLQERKVIKKAQLQQ--TQRSGKINTDFMRQLTASLNRSQQASKKALMERARSDEREEQEERRQAQR---------------------
3UGM Chain:A ((169-1048))-----KPKVRELVAHIVALSQHPAALGTVAVTYQHIITALATHEDIVGVGKQWSGARALEALLTDAGELRGPPLQLDTGQLVKIAKRGGVTAMEAVHASRNALTPLNLTPAQVVAIA--------SNNGGKQALETVQRLLPVLCQAHGLTPAQVVAIASHDGGKQALETMQRLLPVLCQAHGLPPDQVVAIA-----SNIGGKQALETVQRLLPVLCQAHGLTPDQVVAIASHGGGKQALETVQRLLPVLCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNGGKQALETVQRLLPVLCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQTHGLT-----PAQVVAIASHDGGKQALETVQQLLPVLCQAHGLTPDQVVAIASNIGGKQALATVQRLLPVLCQAHGLTPDQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNGGGKQALETVQRLLPVLCQAHGLTQVQVVAIASNIGGKQALETVQRLLPVLCQAHGL-TPAQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNGGGKQALETVQRLLPGLTQEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPAQVVAIASNIG--GKQALETVQRLLPVLCQDHGLT--LAQVVAIASNIGGKQALETVQRLLPVLCQGLTQDQVVAIASNIGGKQALETVQRLLPVLCQDHGLTPDQVVAIASNIGGKQALETVQRLLPVLCQDHGLTLDQVVAIASNGGKQALETVQRLLPVLCQDHGLTPDQVVAIASNSG


General information:
TITO was launched using:
RESULT:

Template: 3UGM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 129959 for 6218 contacts (20.9/contact) +
2D Compatibility (PS) -79075 + (NN) -18191 + (LL) 1560
1D Compatibility (HY) -10000 + (ID) 5450
Total energy: 18803.0 ( 3.02 by residue)
QMean score : 0.299

(partial model without unconserved sides chains):
PDB file : Tito_3UGM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UGM-query.scw
PDB file : Tito_Scwrl_3UGM.pdb: