Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMKKWFGLLFLGLALITLAACGQKTPEDIIKTELKDSYVGYSENPGSDYPFNDGDDVLTFNKKENSITNSQGQMTYFSVIPKEEVPAGTQRVIDELETKLKGTNNFTIIINSTVKNPTKKDSEGAYQIAL----------SDSGKAIRIFELGREPRSFGYYDFSGKAK
1A9X Chain:A ((936-1073))
-----NSTMKKHGRALLSVREGDKERVVDLAAKLLKQGF-----------------ELDATHGTAIVLGEAGINPRLVN-----KVHEGRPHIQDRIKN-----GEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
General information:
TITO was launched using:
RESULT:
Template:
1A9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32565 for 864 contacts (-37.7/contact) +
2D Compatibility (PS) -13312 + (NN) 1822 + (LL) 588
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -46017.0 ( -53.26 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1A9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A9X-query.scw
PDB file :
Tito_Scwrl_1A9X.pdb
: