Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIKRHSIFLWLTTSILAILMAVGMTIYFNTYQASPLARRIAKTATNHKNYLLFRSKGKVKANIIFYQGALVEEEAYSQLARDLADKGYNTYILKTPLNLPVLSP------------HKAKTIINQNH-L-TNVYLAGHSLGGVVASQNAK--VAPVRGLILLASYPSRK----------------------------------------------SDLSHKKLRVLSITASNDHILNWEKYEEAKKRLPN--SSTFRTIVGGNHSRFGNYGHQKGDGKATLSHKSSEKQLATFISNFIH |
| 3DKR Chain:A ((20-246)) | ----------------------------------------------------------GTDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVIT---------------VNSAHHALEEDVIAFMQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55909 for 1338 contacts (-41.8/contact) +
2D Compatibility (PS) -17107 + (NN) -4003 + (LL) 5108
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -77711.0 ( -58.08 by residue)
QMean score : 0.525
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