Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKQGEPDPESNSALKFVLDRAKQAQVPKHVIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRTAYGKNGGNMGASGSVSYLFDKKGVIVFAGD-DADTVFEQLLEADVDVDDVEAEEGTITVYTAPTDLHKGIQALRDNGVEEFQVTELEMIPQSEVVLE-GDDLETFEKLIDALESDDDVQKVYHNVADF-------
1KON Chain:A ((3-246))
GHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLDA-----NPRLRAAVDKALSNNMTRDTLNRAIARGA-----NMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEK-GDEDTIMEAALEAGAE-DVVTYDDGAIDVYTAWEEMGKVRDALEAAGLK-ADSAEVSMIPSTKADM-DAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAATL
General information:
TITO was launched using:
RESULT:
Template:
1KON.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41904 for 1740 contacts (-24.1/contact) +
2D Compatibility (PS) -24728 + (NN) -14485 + (LL) -128
1D Compatibility (HY) -10800 + (ID) 4400
Total energy: -96445.0 ( -55.43 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_1KON.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KON-query.scw
PDB file :
Tito_Scwrl_1KON.pdb
: