Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHQILQNYINSHNLPIIEKDYHKYLTFESLEEDYTYILKDGIVKQSVLSKYGTEFNLRYVTGLEITSILNTDYSQHMG--EPYNVRIESETAHFYKVRRSTFLKDINNDIELQGYVKDFYHNRLEKSMKKMQCMLTNGRIGAISTQLYDLSKMFGEERDNGDIYINFVITNEELGKFCGISTGSSVSRILKQLKDDHIIRIEKQHIIITNVEKLKDHIVF
2GAU Chain:A ((32-230))
-------------EIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILR-----RFHISRIVKPGQFFGMR----PYFAEETCSSTAIAV-ENSKVLAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFEN--DGATLSIYLSREELATLSNM-TVSNAIRTLSTFVSERMLALDGKRIKIIDCDRLQKTARS
General information:
TITO was launched using:
RESULT:
Template:
2GAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76193 for 1408 contacts (-54.1/contact) +
2D Compatibility (PS) -20394 + (NN) -1310 + (LL) 852
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -102295.0 ( -72.65 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_2GAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GAU-query.scw
PDB file :
Tito_Scwrl_2GAU.pdb
: