Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNNVKQLFSFEFWQKFGKALMVVIAVMPAAGLMVSIGNSISLLDPSNVLLGRIANVIAQIGWGVIGNLHILFALAIGGSWAKERAGGAFAAGLSFILINLITGNFFGVKTDMLADSKATVQTVFGATIRVSDYFVNVLGQPALNMGVFVGIISGFVGATAFNKYYNYRKLPDALTFFNGKRFVPFVVIYRSVIVALILSVFWPVVQSGINGFGKWIASSQDSAPILAPFVYGTL-ERLLLPFGLHHMLTIPMNYTQLGGTYTVLTGATKGAQVLGQDPLWLAWV-GDLINLKGSNSSQYHHLLTSVTPARFKVGQMIGASGILMGLSYAMYRNVDKDKKLKYKSMFI----SAAAATFLTGVTEPIEYMFMFAAMPLYLVYAVVQGCAFAMADIVNLRVH---SFGNIEFLTRVPMGIKAGLGGDIFNFVWVTLLFAVLMYFIANFMIKKFNLATAGRNGNYDNEEVDNAPSTASGSADANSQVVQVINLLGGRD---NIEDVDACMTRLRVTVKDGNSVGSEAAWKKAGAMGLVLKGNGVQAIYGPKADVLKSDIQDLLDSGTVIPIVDLETGQPVAAAPVTTYKGI---TEEIVSVANGQVEALDVVKDPVFSQKMMGDGFAVEPTDGNIYVPVSGTVTSVFPTKHAFGLLTESGLEVLVHIGLDTVALDGQPFEVKISSGQKVVAGDLAVVADLEAI-KAAGKETSVII---VFTNVSDIKTVKLEKSGPQIAKTVVAKVEL------ |
1IKP Chain:A ((2-606)) | -------EEAFDLWNECAKACVLDL--------------------KDGVRSSRMSVDPAIADTNGQGVLHYSMVLEGGND-----------------ALKLAIDNALSITSD-------------GLTIRLE-------------------------GGVEPNKPVRYSYTRQARGSWSLNWLVPIGHEKPSNIKVFIHEL-----------------NAGNQLSHMSPIYTIEMGDELLAKLARDATFFVRAHESNEMQPTLAISHA--GVSVVMAQKRWSEWASGKVLCL----LDQLDGVYNYLAQQRCNLDDTWEGKIYRVLAGNPAKHDLDIKPTVISHRLHFPEGGSLAALTAHQACHLPLETFTRHRQPRGA---EQLEQCGYPVQRLVALYLAARLSWNQVDQVIRNALA-SPGSGGDLGEAIREQPEQARLALTLAAAESERFV-----RQGTGNDEAGA-----------ANADVVSLTCPVAAGECAGPADSGDALLERNYPTGAEFLGDGGDVSFSTRGTQNW-------------TVERLLQAHRQLEERGYVFV---GYHGTFLEAAQSIVFGGVRARSQDLDAIWRG----FYIAGDPALAYGYAQD----QEPDARGRIRNGALLRVYVPRSSLPGFYRTSLTLAAPEAAGEVERLIGHPLPLRLD----AITGPEEEGGRLETILGWPLAERTVVIPSAIPTDPRNVGGDLDPSSIPDKEQAISALPDYASQPGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -335841 for 4885 contacts (-68.7/contact) +
2D Compatibility (PS) -60848 + (NN) -4265 + (LL) 9516
1D Compatibility (HY) -2000 + (ID) 5200
Total energy: -398638.0 ( -81.60 by residue)
QMean score : 0.203
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