Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MKLRRPVLEDKEEILAMYKEFQKESSSVDGGFYEPTMHFEDWLDHNLNMELGVGVPDNFVPYIQFVSFDNDNNAIGFLNLRLRLNDTLLEKGGHIGYSIRPRQRGKGYAKEQLKLGIEQAHLK-NINEILVTCHVDNDASKSVILANGGVLEDCLHQTERYWIT-------------
3FBU Chain:A ((1-168))
MFIKAERLLIRKFEFKDWEAVHEYTSD-------------SDVMKYIPEGVFT-EEDTRNFVNKNMGAKNFPVILIGENILVGHIVFHKYFGE----HTYEIGWVFNPKYFNKGYASEAAQATLKYGFKEMKLHRIIATCQPENTPSYRVMEKIGMRREGYFKKCIPHGNEWWDEYYYAILEEE
General information:
TITO was launched using:
RESULT:
Template:
3FBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26263 for 996 contacts (-26.4/contact) +
2D Compatibility (PS) -15373 + (NN) -5607 + (LL) 1016
1D Compatibility (HY) -1200 + (ID) 1250
Total energy: -48677.0 ( -48.87 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_3FBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FBU-query.scw
PDB file :
Tito_Scwrl_3FBU.pdb
: