Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPINSFENYPMSWKPSIDKAEKPIYKALAGQLEQDILNGVLLPGTKLPPQRELADYLDLNVSTISKAFKVCELKGLLSATVGSGTFVSYDALSNAYLLEDTKPTHLIEMGAILPD--HASYEPLLYQLKNMVHEEDYEKWFSYGRAGESLWQKDAAVKLIQRGGFETSVDHILFANGGQNAIAATLASLCKPGDRIGVDHHTYPGLKTVASLLSVQIVPIKSENDEMSPESLEYACKN-----ENIKGLYLIPDYHNPTTSFMSVENRRMVADIVKKYNLFVIEDASYHLLNKNP----------------------LPALA-SFAPQ----QVIHIASLSKSLAPGLRLAYVAVPRQYKEPISKALYNLNITVSPLLAELTARTIVSNQ-----FEVLIESHREQTIRRNQLVNRYVA------GYTCLGVETGIFRWLLL---------------PGKMSGAEFEELAARLGVQVYAAERFVVGNSC----PERAVRVS---------VCAPKTLEELEQGLMILRRLLDDLT---
4JE5 Chain:A ((5-502))---TLPESKDFSYLFSDETNAR---KPSPLKLFQD-PNIIFLGGG--LPLKDYFPWDNLSVDSPKPPFP----QGI-GAPIDEQNCIKYTV-NKDYADKSANPSNDIPLSRALQYGFSAGQPELLNFIRDHTKII------------HDLKYKD---------------WDVLATAGNTNAWESTLRVFCNRGDVILVEAHSFSSSLASAEAQGVITFPVPIDADGIIPEKLAKVMENWTPGAPKPKLLYTIPTGQNPTGTSIADHRKEAIYKIAQKYDFLIVEDEPYYFLQMNPYIKDLKEREKAQSSPKQDHDEFLKSLANTFLSLDTEGRVIRMDSFSKVLAPGTRLGWITGSSKILKPY-LSLHEMTIQAPAGFTQVLVNATLSRWGQKGYLDWLLGLRHEYTLKRDCAIDALYKYLPQSDAFVINPPIAGMFFTVNIDASVHPEFKTKYNSDPYQLEQSLYHKVVER-GVLVVPGSWFKSEGETEPPQPAESKEVSNPNIIFFRGTYAAVSPEKLTEGLKRLGDTLYEEFGIS


General information:
TITO was launched using:
RESULT:

Template: 4JE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2096 -157774 -75.27 -377.45
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -75.27
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.392

(partial model without unconserved sides chains):
PDB file : Tito_4JE5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JE5-query.scw
PDB file : Tito_Scwrl_4JE5.pdb: