Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSSDWLPTACILCE--CNCGIVVQVDDRRLARIRGDKAHPGS-------AGYTCNKALRLDHYQNNRARLSSPMRRRA---DGTYEEIDWDTAIVEIAEGFKQIRDTHGGDKIFYYGG----GGQGNHLGGAYSGAFLKAL-GSRYRSNALAQEKTGEAWVDFQLYGG----HTRGEFENAEVSVFVGKNPWMSQSFPRARVVLNEIAKDPGRSMIVIDPVVTDTAKMADFHLRVQPGCDAWCLAALAAVLVQENLCNEAFLAAHVH----------------------------------------------------------------------GVDTVRAALQEVPVADYAQRCGVDEELLRAAARRIGTAASVSVFEDLGIQQAPNSTVCSYLNKLLWILTGNFAKKGGQHLHSSFAP-LF------SQ--VSGRTPV-----TG--------API----------------IAGLIPG----------NV------V------------PEEIL----------TE-HPDRFRAMIVERGNPAHSLADSAACR--AAFQALELMVVVDVAMTETARLAHYVLPAASQFEKPEATFFNFEFPRNGFQLRRPLFPPLPGTLPEPEIWARLVRALGVVDEA-DLRPLREAA--AQGRQAYTEAFLAAAATNPTVAKLTAYVLYETLGPTLPDGLAGAAALWGLAQKTAMAYPDAVRRAGHA-DG-----NALFDAILERPSGVTFTVH-NYEDDFALISHPDHKIALEIPEML--AEIRSLTQTPSR-LTTPQLPIVLSVGERRAYTANDIFRDPSWR-KRD-ANGALRVSVEDAQALGLADGCLARITTAAGSAEATVEVTETMLAGHAALPNGFGLDYTGDDGRTVVAGVAPNALTST--RWRDPYAGTP--------------WHKHVPAAIRRADAESPIWYPKWAILPARGVLA |
| 2IVF Chain:A ((80-976)) | -------GSHLNICWPQGSCKFYVYVRNGIVWREEQAAQTPACNVDYVDYNPLGCQKGSAFNNNLYGDERVKYPLKRVGKRGEGKWKRVSWDEAAGDIADSIIDSFEAQGSDGFILDAPHVHAGSIAWGAGFRM-TYLMDGVSPDIN----VDIGD--TYMGAFHTFGKMHMGYSADNLLDAELIFMTCSNWSYTYPSSY-H-FLSEA-RYKGAEVVVIAPDFNPTTPAADLHVPVRVGSDAAFWLGLSQVMIDEKLFDRQFVCEQTDLPLLVRMDTGKFLSAEDVDGGEAKQFYFFDEKAGSVRKASRGTLKLDFMPALEGTFSARLKNGKTIQVRTVFEGLREHLKDYTPEKASAKCGVPVSLIRELGRKVAKK-RTCSYIGFSSAKSYHGDLMERSLFLAMALSGNWGKPGTGAFAWAYSDDNMVYLGVMSKPTAQGGMDELHQMAEGFNKRTLEADPTSTDEMGNIEFMKVVTSAVGLVPPAMWLYYHVGYDQLWNNKAWTDPALKKSFGAYLDEAKEKGWWTNDHIRPAPDKTPQVYMLLSQNPMRRKRSGAKMFPDVLFPKLKMIFALETRMSSSAMYADIVLPCAWYYEKH-EMTTPCS-GNPFFTFVDRSVAPPGECREEWDAIALILKKVGERAAARGLTEFNDHNGRKRRYDELYKKFTMD-G---------HLLTNEDCLKEMVDINRAVG-VF-----AKDYTYEKFKKEGQTRFLSMGTGVSRYAHANEVDVTKPIYPMRWHFDDKKVFPTHTRRAQFYLDHDWYLEAGESLPTHKDTPMVGGDHPFKITGGHPRV-SIHSTHLTNSHLSRLHRGQPVVHMNSKDAAELGIKDGDMAKLFNDFADCEIMVRTAPNVQPKQCIVYFWDAHQYKG--------WKPYDILLIGMPKPLHLAGGYEQFRYYFMNGSPAPVTDRGVRVSIKKA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275990 for 6392 contacts (-43.2/contact) +
2D Compatibility (PS) -72959 + (NN) -16439 + (LL) 4392
1D Compatibility (HY) -21600 + (ID) 5850
Total energy: -388446.0 ( -60.77 by residue)
QMean score : 0.385
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