Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDGSRQELRVRSGLLQIEDCLDADGGIALPAGTTLISLIERNIKYVGDLVAYRYLDHARSAAGCALEVTWTQFGMRLAAIGAHVQRF-AGPGDRVAILAPQGIDYVCGFYAAIKAGTVAVPLFAPELPGHAERLDTALRDSEPAVILTTAAAKNAVEGFLNNVPRLRKPTVLVIDQ-------IPDREGELFVPVEMDIDAVSHLQYTSGSTRPPVGVEITHRAVGTNLVQ-MILSIDLLNRNTHGVSWLPLYHDMGLSM-IGFPAVYGGHSTLMSPTAFVRRPLRWIQALSEGSRTGRVVTA-APNFAYEWAAQRGLPAQGDDVDLSNV-VLIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLLVATIDHAAEPTVVYLDPEQLGAGHATRVAPDAPNAVVHVSCGHVARSLWAVIVDPDTGPEAGAELPDGEIGEVWLQGDNVARGYWGRPEETRMTFGARLQSPLAEGSHADGSAIDDTWLRTGDLGVYL-DGELYITGRIADLLTIDGRNHYPQDIEATAAEASPMVRRGYITAFTVPASDGDDRNQRLVIIAERAAGTS--RSDPRPALDAIRAAVCNRHGLSVADLSFLPAGAIPRTTSGKLARQACRAQYLSGRLGVH |
| 4WV3 Chain:A ((9-519)) | --------------------------------YYNAVDILERNLPVRANKTALFTPD---------REMTFRQVSNEANQVGNALKGLGVRFGECVGLLTLDSAEWVTSFFGIVKLGAIAVGINTLL-K--PPEYEYILRDCRARVLIVHQEFLPLIESIRGNLPMLE--HIVVIG-GYLSFNDWIRPQPTTLEAAQSHREDICSLNYSSG-TGGPKGIPHAHKDYPLTAQLWGVNVLG-LRESDRTFALAKLFFTFGTGGNLIFPWYVGASCVLFPGAA--RVASNVLSTISR---FKPTIFYNAPTGYAAALALKD----FSQHDLSSLRLCVSASEALPAALWYAWKEATG------VDIIDGIGCTENFHIFISNRPG---------------------------DIRPGSSGKPVEGYELKLVDDE-G----KTVPAGEIGNVLLRSETAALSYWHNFEKSRQTF-------------------QGEWLATGDKYFVDADGYYWHAGRSDDMLKVGGIWVSPVEVESTL-IQHPAVQEC--AVIGCPDQS---RLIKPKAFIILKPEQIPSEALIRQITDHCTEKMAA--YKRPRWIEF--VTELPKTATGKIQRFKLRSAAKLA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -301555 for 4350 contacts (-69.3/contact) +
2D Compatibility (PS) -52199 + (NN) -6815 + (LL) 5400
1D Compatibility (HY) -18400 + (ID) 5200
Total energy: -378769.0 ( -87.07 by residue)
QMean score : 0.484
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