Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITRMSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEMNAIGGQEILFPALLPRAPYETT-NRWT-QYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGEYSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAYQRIFDRLQVR-YVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARPDTLPIDGLPEAVVHDTGDTPTIASLVAWANEADLGRTVTAADTLKNVLIKVRQPGGDTELLAIGVPGDREVDDKRLGAALEPADYALLDDDDFAKHPFLVKGYIGPKALRENNVRYLVDPRIVDGTSWITGADQPGRHVVGLVAGRDFTADGTIEAAEVREGDPSPDGAGPLVMARGIEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDELGLRWPSTVAPFDVHLVIANKDAQARAGATALAADLDRL--GVEVLLDDRQASPGVKFKDAELLGMPWIVVVGR-GWADGVVELRDRFSGQTRELVAGASLATDIAAAVTG |
| 1HTT Chain:A ((6-422)) | ------------------------------------AIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLL-YNQEQRLWYIGPMFRHERPQ---KGRYRQFHQLGCEVFGLQGPDID---AELIMLTARWWRALGISEHVTLEL---------NS----------IGSLEARAN--------------------------------------------------------------------------------------------YL----DEES-REHFAGLCKLL-ES--------AGIAYTVNQRLVRGLDYYNRT------VFEWVTN------------------------QGTVCAGGRYDGLVEQLGG-----------------RATPAVGFAMGLERLVLLVQAVNPE------FKADPVVDIYLVASGAD--TQSAAMALAERLRDELPGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQ-TAVAQDSVAAHLRTLL-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HTT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -147963 for 2746 contacts (-53.9/contact) +
2D Compatibility (PS) -38228 + (NN) -13025 + (LL) 11456
1D Compatibility (HY) -13200 + (ID) 3750
Total energy: -204710.0 ( -74.55 by residue)
QMean score : 0.393
|
|
|