Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVLFAYPGQGAQRPGMLAALPDEPPVRACLEQAADCLGQAPAELE---SAEALRGTRAVQLCLLIAGVAASRLLETRGHRPGLVAGLSIGAYPAAVVAGALDFDDALRLVALRGELMQAAWPEG-YGMSAILGLEQAQLEALILAVRREHPPLYLANVNAERQLVVAGSEAALAALAERARAAGASAAKRLAVSVPSHCALLDEPAARLAEAFAGIRLHRPRVPYLSSSRARLVAEPAALADDLAGNMARRVEWLATLRSAYERGARLHLELPPGRVLSGLARPLFGCATPAFEGSRADTLDALLREEEKRTR |
1NM2 Chain:A ((1-315)) | HMLVLVAPGQGAQTPGFLTDWLALPGAADRVAAWSDAIGLDLAHFGTKADADEIRDTSVAQPLLVAAGILSAAALG-TGFTPGAVAGHSVGEITAAVFAGVLDDTAALSLVRRRGLAMAEAAAVTETGMSALLGGDPEVSVAHLER-----LGLTPANVNGAGQIVAAGTMEQLAALNED-KPEGVRKVVPLKVAGAFHTRHMAPAVDKLAEAAKALTPADPKVTYVSNKDGRAVASGTEVLDRLVGQVANPVRWDLCMETFKELGVTAIIEVCPGGTLTGLAKRALP-GVKTLALKTPDDLDAARELVAEHT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NM2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193248 for 2784 contacts (-69.4/contact) +
2D Compatibility (PS) -33279 + (NN) -24357 + (LL) 892
1D Compatibility (HY) -8400 + (ID) 5000
Total energy: -263392.0 ( -94.61 by residue)
QMean score : 0.522
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