Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAMTVPPSLLPLEPFPTAPDTRASTPHIRLHGLGKRYPGG---VQALREIDLEIRRGEVFGIIGRSGAGKSSLIRTLNRLERPSEGQVLIDDEDIGGYDGQRLVALRR-RIGMIFQHFNLMSAKTVRQNIALPL------RVAGVPRARIEERVAGLLQLVGLEEK-RDAYPAQLSGGQKQRVGIARALVHQPQILLCDEATSALDPESTQAILALLRDINRRLGLTIVLITHEMAVIREICDRVVVLECGRIVEQGEVWEVFGDPRHAVTRSLLGSLRAALPADLQARLRQAPGAGDPVLLDLQYTGASRRVPDLLAIARAIGQRVDLLHGGIERIQGRALGRLLLQVGAPPGELPGVLAKAALVADKVEVLGHVAHA |
| 1L2T Chain:B ((2-232)) | ----------------------------IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRK---RALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVAR-FGERIIYLKDGE-VEREEKLRGF-------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175213 for 1785 contacts (-98.2/contact) +
2D Compatibility (PS) -23586 + (NN) -6814 + (LL) 9572
1D Compatibility (HY) -19600 + (ID) 4450
Total energy: -220091.0 ( -123.30 by residue)
QMean score : 0.467
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